各种RNAseq原理

2024-09-04 17:31:08

RNA Sequencing Methods
- Low-Level RNA Detection
  - CEL-Seq
  - CirSeq
  - CLaP
  - CytoSeq
  - Digital RNA Sequencing
  - DP-Seq
  - Drop-Seq
  - Hi-SCL
  - InDrop
  - MARS-Seq
  - Nuc-Seq
  - PAIR
  - Quartz-Seq
  - scM&T-Seq
  - SCRB-Seq
  - scRNA-Seq
  - scTrio-seq
  - Smart-Seq
  - Smart-Seq2
  - snRNA-Seq
  - STRT-Seq
  - SUPeR-Seq
  - TCR-LA-MC PCR
  - TIVA
  - UMI
  - 5C
  - 5C
  - Div-Seq
  - FRISCR
  - TCR Chain Pairing
  - AbPair
- RNA Modifications
  - ICE
  - MeRIP-Seq
  - miCLIP-m6A
  - Pseudo-Seq
  - PSI-Seq
- RNA Structure
  - CAP-seq
  - Cap-Seq
  - CIP-TAP
  - PARS-Seq
  - SPARE
  - Structure-Seq/DMS-Seq
  - CIRS-Seq
  - icSHAPE
  - SHAPE-MaP
  - SHAPE-Seq
- RNA Transcription
  - 2P-Seq
  - 3’NT Method
  - 3P-Seq
  - 3Seq
  - 3′-Seq
  - 5′-GRO-Seq
  - BruChase-Seq
  - BruDRB-Seq
  - Bru-Seq
  - CAGE
  - CHART
  - ChIRP
  - ClickSeq
  - GRO-seq
  - NET-Seq
  - PAL-Seq
  - PARE-Seq
  - PEAT
  - PRO-Cap
  - PRO-Seq
  - RAP
  - RARseq
  - RASL-Seq
  - RNA-Seq
  - SMORE-Seq
  - TAIL-Seq
  - TATL-Seq
  - TIF-Seq
  - TL-Seq
  - 4sUDRB-Seq
  - CaptureSeq
  - cP-RNA-Seq
  - FRT-Seq
  - GMUCT
  - mNET-Seq
- RNA-Protein Interactions
  - AGO-CLIP
  - CLASH
  - CLIP-Seq or HITS-CLIP
  - DLAF
  - eCLIP
  - hiCLIP
  - iCLIP
  - miR-CLIP
  - miTRAP
  - PAR-CLIP
  - PIP-Seq
  - Pol II CLIP
  - RBNS
  - Ribo-Seq or ARTSeq
  - RIP-Seq
  - TRAP-Seq
  - TRIBE
  - BrdU-CLIP
  - HiTS-RAP
  - irCLIP
DNA Sequencing Methods
- Protein-Protein Interaction
  - PD-Seq
  - ProP-PD/PDZ-Seq
- Sequence Rearrangements
  - 2b-RAD
  - CPT-seq
  - ddRADseq
  - Digenome-seq
  - EC-seq
  - hyRAD
  - RAD-Seq
  - Rapture
  - RC-Seq
  - Repli-Seq
  - SLAF-seq
  - TC-Seq
  - Tn-Seq/INSeq
  - Bubble-Seq
  - NSCR
  - NS-Seq
  - Rep-Seq/Ig-Seq/MAF
- DNA Break Mapping
  - BLESS
  - DSB-Seq
  - GUIDE-seq
  - HTGTS
  - LAM-HTGTS
  - Break-seq
  - SSB-Seq
- DNA Protein Interactions
- Epigenetics
- Low-Level DNA Detection
  - Safe-SeqS
  - scAba-seq
  - scATAC-Seq (Cell index variation)
  - scATAC-Seq (Microfluidics variation)
  - scBS-Seq
  - scM&T-Seq
  - scRC-Seq
  - SMDB
  - smMIP
  - G&T-Seq
  - 5C
  - 5C
  - DR-Seq
  - G&T-Seq
  - MALBAC
  - MDA
  - MIDAS/IMS-MDA/ddMDA
  - scM&T-Seq
  - Drop-ChIP/scChIP-seq
  - Duplex-Seq
  - MIPSTR
  - nuc-seq/SNES
  - OS-Seq

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